d71e5798-baa8-4e38-92a0-4c2e56d5baa8 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESP4MARXG

Description:4DNESP4MARXG: Micro-C on H1-DE cells - protocol variations - Formaldehyde+DSG Micro-C on definitive endoderm derived from H1 embryonic stem cells (Maehr lab protocol) with 1% Formaldehyde and 3mM DSG crosslinking

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESP4MARXG

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	44b0b763-065f-40f3-8432-8bd66d9f1be3 Subject (Entity type)	A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	977febe9-dcbb-4d26-a122-da8e76ba56bf Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESP4MARXG
	4DNFIRKXDG9H.txt.gz File (Entity type)	A 4.98 MB file from 4DN produced from OBI:0003302 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI9IORQOG.bed.gz File (Entity type)	A 220 KB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI9E222YJ.mcool File (Entity type)	A 1.03 GB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIGZCGSA8.bw File (Entity type)	A 211 KB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIZMOVYIN.hic File (Entity type)	A 1.70 GB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIGC4DUMK.bw File (Entity type)	A 322 KB file from 4DN produced from OBI:0003302 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIH3CQYRW.pairs.gz File (Entity type)	A 3.56 GB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

44b0b763-065f-40f3-8432-8bd66d9f1be3

Subject (Entity type)

A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

977febe9-dcbb-4d26-a122-da8e76ba56bf

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESP4MARXG

4DNFIRKXDG9H.txt.gz

File (Entity type)

A 4.98 MB file from 4DN produced from OBI:0003302 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI9IORQOG.bed.gz

File (Entity type)

A 220 KB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI9E222YJ.mcool

File (Entity type)

A 1.03 GB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIGZCGSA8.bw

File (Entity type)

A 211 KB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIZMOVYIN.hic

File (Entity type)

A 1.70 GB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIGC4DUMK.bw

File (Entity type)

A 322 KB file from 4DN produced from OBI:0003302 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIH3CQYRW.pairs.gz

File (Entity type)

A 3.56 GB file from 4DN produced from OBI:0003302 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.