db03ba41-a2a5-49f4-82ec-75b282977f04 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNES4MY14SY

Description:4DNES4MY14SY: Hi-C on H1-DE cells - protocol variations - Formaldehyde+DSG, DpnII In situ Hi-C with DpnII on definitive endoderm derived from H1 embryonic stem cells (Maehr lab protocol) with 1% Formaldehyde and 3mM DSG crosslinking

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNES4MY14SY

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	44b0b763-065f-40f3-8432-8bd66d9f1be3 Subject (Entity type)	A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	5daf287f-1c02-4635-a4be-215bc97e7290 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNES4MY14SY
	4DNFI2LU8IPN.bw File (Entity type)	A 8.44 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI57OYJ68.mcool File (Entity type)	A 1.50 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIUXDSLHY.pairs.gz File (Entity type)	A 4.04 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI4C6XY7T.txt.gz File (Entity type)	A 1.04 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIKIEOU3L.txt.gz File (Entity type)	A 5.03 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI51B5JHD.bed.gz File (Entity type)	A 199 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFID5RQPTC.bw File (Entity type)	A 212 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

44b0b763-065f-40f3-8432-8bd66d9f1be3

Subject (Entity type)

A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

5daf287f-1c02-4635-a4be-215bc97e7290

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNES4MY14SY

4DNFI2LU8IPN.bw

File (Entity type)

A 8.44 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI57OYJ68.mcool

File (Entity type)

A 1.50 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIUXDSLHY.pairs.gz

File (Entity type)

A 4.04 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI4C6XY7T.txt.gz

File (Entity type)

A 1.04 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIKIEOU3L.txt.gz

File (Entity type)

A 5.03 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI51B5JHD.bed.gz

File (Entity type)

A 199 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFID5RQPTC.bw

File (Entity type)

A 212 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.