CFDE Workbench
Information PortalData PortalKnowledge Portal
Search
Graph
Enrichment
Cross
Assistant
Data Matrix
Use Cases
Tools & Workflows
Submit
Documentation
CFDE Workbench

0c6c89b9-7d47-47b5-a14b-48cb9282dbd6 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)
Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)
Dcc:

4DN

DCC (Entity type)
Persistent Id:https://data.4dnucleome.org/4DNEXKGUGFGC
Description:Biological replicate 2, Technical replicate 1 of 4DNESYHMLB63
Creation Time:2023-06-09T00:00:00
Abbreviation:4DNEXKGUGFGC
Results found

Linked to

 

Label

Description

 

Project

71171a4e-dca1-44cb-8375-fafd896c6923

Project (Entity type)

4DN-DCIC PHASE 2: This file is the result of a standardized pipeline adopted by the 4DNucleome conso...

Collection

c8b0303c-1168-4924-9ee2-18c6b5f6b383

Collection (Entity type)

4DNESYHMLB63: ChIP-seq on H1 Definitive Endoderm (Tier1) cells - H3K4me1 Replicates of H3K4me1 ChIP-...

File

4DNFIBDYQI3W.bed.gz

File (Entity type)

A 234 MB file from 4DN produced from OBI:0000716 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

File

4DNFIBR6I3VH.fastq.gz

File (Entity type)

A 712 MB file from 4DN produced from OBI:0000716 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

File

4DNFIZUSAYP5.fastq.gz

File (Entity type)

A 695 MB file from 4DN produced from OBI:0000716 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

  • Project

    71171a4e-dca1-44cb-8375-fafd896c6923

    Project (Entity type)

    4DN-DCIC PHASE 2: This file is the result of a standardized pipeline adopted by the 4DNucleome conso...

  • Collection

    c8b0303c-1168-4924-9ee2-18c6b5f6b383

    Collection (Entity type)

    4DNESYHMLB63: ChIP-seq on H1 Definitive Endoderm (Tier1) cells - H3K4me1 Replicates of H3K4me1 ChIP-...

  • File

    4DNFIBDYQI3W.bed.gz

    File (Entity type)

    A 234 MB file from 4DN produced from OBI:0000716 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

  • File

    4DNFIBR6I3VH.fastq.gz

    File (Entity type)

    A 712 MB file from 4DN produced from OBI:0000716 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

  • File

    4DNFIZUSAYP5.fastq.gz

    File (Entity type)

    A 695 MB file from 4DN produced from OBI:0000716 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

    • DISPLAY PER PAGE
    CFDE Workbench
    Report a bug
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    @CFDE Workbench 2025
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    CFDE Workbench
    Report a bug
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    @CFDE Workbench 2025
    This repository is under review for potential modification in compliance with Administration directives.