4a8987a6-764b-4d34-ab4d-35981d21486e (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESLYL1IOJ

Description:4DNESLYL1IOJ: Hi-C on H1-DE cells - protocol variations - Formaldehyde+DSG, DdeI In situ Hi-C with DdeI on definitive endoderm derived from H1 embryonic stem cells (Maehr lab protocol) with 1% Formaldehyde and 3mM DSG crosslinking

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESLYL1IOJ

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	44b0b763-065f-40f3-8432-8bd66d9f1be3 Subject (Entity type)	A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	1dbe938c-4c83-4495-9a61-388a7d149ed2 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESLYL1IOJ
	4DNFI897LKMM.pairs.gz File (Entity type)	A 3.96 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIWMMRO25.bw File (Entity type)	A 211 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIFHU75I5.hic File (Entity type)	A 2.64 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIUHPMU5N.txt.gz File (Entity type)	A 1.05 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIRBGNI7N.txt.gz File (Entity type)	A 5.19 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFICUWOV2L.bw File (Entity type)	A 321 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI8XQSWEI.bw File (Entity type)	A 8.38 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

44b0b763-065f-40f3-8432-8bd66d9f1be3

Subject (Entity type)

A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

1dbe938c-4c83-4495-9a61-388a7d149ed2

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESLYL1IOJ

4DNFI897LKMM.pairs.gz

File (Entity type)

A 3.96 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIWMMRO25.bw

File (Entity type)

A 211 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIFHU75I5.hic

File (Entity type)

A 2.64 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIUHPMU5N.txt.gz

File (Entity type)

A 1.05 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIRBGNI7N.txt.gz

File (Entity type)

A 5.19 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFICUWOV2L.bw

File (Entity type)

A 321 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI8XQSWEI.bw

File (Entity type)

A 8.38 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.