fef702b4-9621-4d47-b7fe-8fb347568efa (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

251215 4dn c2m2 submission.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESXP5VE8C

Description:4DNESXP5VE8C: Hi-C on mouse cerebellar granule neurons - 28 day old neurons - Rad21 KD in situ Hi-C on cerebellar granule neurons with rad21 sgRNA isolated using FANS at day 28 after in vivo electroporation from Gabra6-Cre; LSL-Cas9-EGFP mouse postnatal day 34

Creation Time:2025-01-29T00:00:00

Abbreviation:4DNESXP5VE8C

Results found

Linked to

	Label	Description
	cf1cc388-e816-4061-b354-61bc4f8a23f8 Project (Entity type)	MECHANISMS OF GENOME ORGANIZATION IN BRAIN DEVELOPMENT AND BEHAVIOR
	6fc2e927-7ef0-4e9a-b7a8-c6d1702d066a Subject (Entity type)	A subject from 4DN produced as part of the cf1cc388 e816 4061 b354 61bc4f8a23f8 project
	7758e805-c1be-4c14-a537-adc2981ac191 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESXP5VE8C
	76aae414-8080-48c6-80d0-aad7939483d4 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESXP5VE8C
	4DNFITCWRZHW.bw File (Entity type)	A 7.48 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIF1CGHBM.mcool File (Entity type)	A 1.85 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIDDLB7ZD.bw File (Entity type)	A 190 KB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFINBNXOKI.bed.gz File (Entity type)	A 156 KB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIFZM3CWZ.hic File (Entity type)	A 2.77 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFISJZD7QI.pairs.gz File (Entity type)	A 4.37 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

cf1cc388-e816-4061-b354-61bc4f8a23f8

Project (Entity type)

MECHANISMS OF GENOME ORGANIZATION IN BRAIN DEVELOPMENT AND BEHAVIOR

6fc2e927-7ef0-4e9a-b7a8-c6d1702d066a

Subject (Entity type)

A subject from 4DN produced as part of the cf1cc388 e816 4061 b354 61bc4f8a23f8 project

7758e805-c1be-4c14-a537-adc2981ac191

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESXP5VE8C

76aae414-8080-48c6-80d0-aad7939483d4

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESXP5VE8C

4DNFITCWRZHW.bw

File (Entity type)

A 7.48 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIF1CGHBM.mcool

File (Entity type)

A 1.85 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIDDLB7ZD.bw

File (Entity type)

A 190 KB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFINBNXOKI.bed.gz

File (Entity type)

A 156 KB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIFZM3CWZ.hic

File (Entity type)

A 2.77 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFISJZD7QI.pairs.gz

File (Entity type)

A 4.37 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.