bdf97c84-715c-447b-a214-bc993706eb93 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESN49VY8X

Description:4DNESN49VY8X: Hi-C on HFF cells - protocol variations - Formaldehyde+DSG, DdeI and DpnII, HFFc6 (Tier 1) Hi-C experiments on HFFc6 crosslinked with both FA and DSG, digested with DdeI and DpnII.

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESN49VY8X

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	10aa2d32-9fd4-46ce-a585-827d8c7810c3 Subject (Entity type)	A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	6e7356c3-36d0-4ea9-9984-aa3221e69e79 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESN49VY8X
	2cf49dae-3779-4413-89ef-d9f07b40ca4a Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESN49VY8X
	4DNFI8ZYY7VT.mcool File (Entity type)	A 7.31 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFINR377P1.txt.gz File (Entity type)	A 1.04 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI11DDEHF.txt.gz File (Entity type)	A 4.88 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI5SUHCGZ.hic File (Entity type)	A 10.5 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIYIDJIBN.pairs.gz File (Entity type)	A 57.9 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIKIC2D7K.bw File (Entity type)	A 8.44 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

10aa2d32-9fd4-46ce-a585-827d8c7810c3

Subject (Entity type)

A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

6e7356c3-36d0-4ea9-9984-aa3221e69e79

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESN49VY8X

2cf49dae-3779-4413-89ef-d9f07b40ca4a

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESN49VY8X

4DNFI8ZYY7VT.mcool

File (Entity type)

A 7.31 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFINR377P1.txt.gz

File (Entity type)

A 1.04 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI11DDEHF.txt.gz

File (Entity type)

A 4.88 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI5SUHCGZ.hic

File (Entity type)

A 10.5 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIYIDJIBN.pairs.gz

File (Entity type)

A 57.9 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIKIC2D7K.bw

File (Entity type)

A 8.44 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.