cd4c076a-02d8-40b2-b95b-86782d1f78da (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESFLV3UMN

Description:4DNESFLV3UMN: Hi-C on H1-DE cells - protocol variations - Formaldehyde+EGS, DdeI In situ Hi-C with DdeI on definitive endoderm derived from H1 embryonic stem cells (Maehr lab protocol) with 1% Formaldehyde and 3mM EGS crosslinking

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESFLV3UMN

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	44b0b763-065f-40f3-8432-8bd66d9f1be3 Subject (Entity type)	A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	5d33766a-4780-4972-b01b-693858d3bd97 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESFLV3UMN
	4DNFI5OSKSZW.txt.gz File (Entity type)	A 1.05 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIDPX7DAG.bw File (Entity type)	A 8.47 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI26538BN.txt.gz File (Entity type)	A 4.96 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI3724MS8.mcool File (Entity type)	A 1.07 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIDSWKFF5.hic File (Entity type)	A 1.74 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIT4VUJIS.bw File (Entity type)	A 322 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIHUJDRIL.bw File (Entity type)	A 212 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

44b0b763-065f-40f3-8432-8bd66d9f1be3

Subject (Entity type)

A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

5d33766a-4780-4972-b01b-693858d3bd97

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESFLV3UMN

4DNFI5OSKSZW.txt.gz

File (Entity type)

A 1.05 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIDPX7DAG.bw

File (Entity type)

A 8.47 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI26538BN.txt.gz

File (Entity type)

A 4.96 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI3724MS8.mcool

File (Entity type)

A 1.07 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIDSWKFF5.hic

File (Entity type)

A 1.74 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIT4VUJIS.bw

File (Entity type)

A 322 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIHUJDRIL.bw

File (Entity type)

A 212 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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