N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c UTD-DN0128 UTD-DN0128-SC-VH-run004 (Biosample)

Project:

U19NS130608

Project (Entity type)

Id Namespace:

SPARC sample namespace

Identifier Namespace (Entity type)

Dcc Asset:

C2M2 datapackage 20251215.zip

Processed File (Entity type)

Dcc:

SPARC

DCC (Entity type)

Anatomy:

spinal cord

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c Collection (Entity type)	Single nuclei sequencing of spinal cord from 19 subjects (1 dorsal horn and 1 ventral horn per subje...
	N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c UTD-DN0128 Subject (Entity type)	A subject from SPARC produced as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis clustering gene expression kmeans 10 clusters clusters.csv File (Entity type)	A 220 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis umap gene expression 2 components projection.csv File (Entity type)	A 489 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis clustering gene expression kmeans 5 clusters clusters.csv File (Entity type)	A 220 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis pca gene expression 10 components features selected.csv File (Entity type)	A 348 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count sample raw feature bc matrix features.tsv.gz File (Entity type)	A 338 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count sample filtered feature bc matrix.h5 File (Entity type)	A 26.2 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis diffexp gene expression kmeans 4 clusters differential expression.csv File (Entity type)	A 4.49 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis clustering gene expression kmeans 9 clusters clusters.csv File (Entity type)	A 220 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c

Collection (Entity type)

Single nuclei sequencing of spinal cord from 19 subjects (1 dorsal horn and 1 ventral horn per subje...

N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c UTD-DN0128

Subject (Entity type)

A subject from SPARC produced as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis clustering gene expression kmeans 10 clusters clusters.csv

File (Entity type)

A 220 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis umap gene expression 2 components projection.csv

File (Entity type)

A 489 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis clustering gene expression kmeans 5 clusters clusters.csv

File (Entity type)

A 220 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis pca gene expression 10 components features selected.csv

File (Entity type)

A 348 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count sample raw feature bc matrix features.tsv.gz

File (Entity type)

A 338 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count sample filtered feature bc matrix.h5

File (Entity type)

A 26.2 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis diffexp gene expression kmeans 4 clusters differential expression.csv

File (Entity type)

A 4.49 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0128 sam-UTD-DN0128 sam-UTD-DN0128-SC-VH sam-UTD-DN0128-SC-VH-run004 count analysis clustering gene expression kmeans 9 clusters clusters.csv

File (Entity type)

A 220 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.