transcription profiling assay (Assay Type)

Id:OBI:0000424

Description:An assay that determines gene expression and transcription activity using ribonucleic acids collected from a material entity.

Results found

Linked to

	Label	Description
	derivative sub-9 sub-9-sam-1 Dog9 20X Macrophage (3).tif File (Entity type)	A 12.6 MB file from SPARC produced from OBI:0000424 as part of the OT2OD025308 project
	primary sub-UTD-DN0177 sam-UTD-DN0177 sam-UTD-DN0177-SC-DH sam-UTD-DN0177-SC-DH-run004 count analysis diffexp gene expression kmeans 5 clusters differential expression.csv File (Entity type)	A 5.57 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0105 sam-UTD-DN0105 sam-UTD-DN0105-SC-VH sam-UTD-DN0105-SC-VH-run008 count analysis tsne gene expression 2 components projection.csv File (Entity type)	A 605 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	derivative sam-ant09B sam-ant09B ses-gas444vip555cgrp647 10t.tif File (Entity type)	A 544 MB file from SPARC produced from OBI:0000424 as part of the OT2OD023847 project
	primary sub-UTD-DN0071 sam-UTD-DN0071 sam-UTD-DN0071-SC-VH count sample raw feature bc matrix.h5 File (Entity type)	A 27.5 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary Fig14 SD c fiber Thresh 500 D 10 Duration 4 Type 8 Schild94.dat File (Entity type)	A 8.00 B file from SPARC produced from OBI:0000424 as part of the OT2OD025340 project
	primary sub-cat2 sam-2 cat2 DICOMs for 3D CT image Cat 2, day 14, 15 ml contrast DAMSER.XA. .0008.0207.2018.01.17.08.20.42.843750.2112983.IMA File (Entity type)	A 526 KB file from SPARC produced from OBI:0000424 as part of the OT2OD023873 project
	primary sub-20171212-NTS-3 VNS forestomach 7 ch28.mat File (Entity type)	A 75.8 MB file from SPARC produced from OBI:0000424 as part of the OT2OD023847 project
	primary sub-fMRI GES 10760 8 perf-20180517 8 fmri 18.nii.gz File (Entity type)	A file from SPARC produced from OBI:0000424 as part of the OT2OD023847 project
	primary sub-cat2 sam-3 cat2 DICOM for 3D CT Cat 2, day 30, 30 ml contrast DAMASER.XA. .0006.0370.2018.01.29.08.16.40.609375.2312199.IMA File (Entity type)	A 526 KB file from SPARC produced from OBI:0000424 as part of the OT2OD023873 project

derivative sub-9 sub-9-sam-1 Dog9 20X Macrophage (3).tif

File (Entity type)

A 12.6 MB file from SPARC produced from OBI:0000424 as part of the OT2OD025308 project

primary sub-UTD-DN0177 sam-UTD-DN0177 sam-UTD-DN0177-SC-DH sam-UTD-DN0177-SC-DH-run004 count analysis diffexp gene expression kmeans 5 clusters differential expression.csv

File (Entity type)

A 5.57 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0105 sam-UTD-DN0105 sam-UTD-DN0105-SC-VH sam-UTD-DN0105-SC-VH-run008 count analysis tsne gene expression 2 components projection.csv

File (Entity type)

A 605 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

derivative sam-ant09B sam-ant09B ses-gas444vip555cgrp647 10t.tif

File (Entity type)

A 544 MB file from SPARC produced from OBI:0000424 as part of the OT2OD023847 project

primary sub-UTD-DN0071 sam-UTD-DN0071 sam-UTD-DN0071-SC-VH count sample raw feature bc matrix.h5

File (Entity type)

A 27.5 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary Fig14 SD c fiber Thresh 500 D 10 Duration 4 Type 8 Schild94.dat

File (Entity type)

A 8.00 B file from SPARC produced from OBI:0000424 as part of the OT2OD025340 project

primary sub-cat2 sam-2 cat2 DICOMs for 3D CT image Cat 2, day 14, 15 ml contrast DAMSER.XA. .0008.0207.2018.01.17.08.20.42.843750.2112983.IMA

File (Entity type)

A 526 KB file from SPARC produced from OBI:0000424 as part of the OT2OD023873 project

primary sub-20171212-NTS-3 VNS forestomach 7 ch28.mat

File (Entity type)

A 75.8 MB file from SPARC produced from OBI:0000424 as part of the OT2OD023847 project

primary sub-fMRI GES 10760 8 perf-20180517 8 fmri 18.nii.gz

File (Entity type)

A file from SPARC produced from OBI:0000424 as part of the OT2OD023847 project

primary sub-cat2 sam-3 cat2 DICOM for 3D CT Cat 2, day 30, 30 ml contrast DAMASER.XA. .0006.0370.2018.01.29.08.16.40.609375.2312199.IMA

File (Entity type)

A 526 KB file from SPARC produced from OBI:0000424 as part of the OT2OD023873 project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.