metatranscriptome sequencing assay (Assay Type)

Id:OBI:0002760

Description:An RNA-seq assay that determines the RNA sequence of microbial transcripts from a microbioal community of mixed species from a given microbiome.

Results found

Linked to

	Label	Description
	PSMB4MBK pathabundance relab.biom.bz2 File (Entity type)	A 26.8 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project
	EP285935 K50 MV1R.metatranscriptome.bve.profile.txt.bz2 File (Entity type)	A 1.18 KB file from HMP produced from OBI:0002760 as part of the MOMSPI project
	HSM7J4QJ ecs relab.biom.bz2 File (Entity type)	A 403 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project
	SRR5949556 2.fastq File (Entity type)	A 2.48 GB file from HMP produced from OBI:0002760 as part of the IBDMDB project
	CSM67UBH genefamilies relab.biom.bz2 File (Entity type)	A 367 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project
	EP783101 K20 MV1R pathabundance.tsv.bz2 File (Entity type)	A 3.57 KB file from HMP produced from OBI:0002760 as part of the MOMSPI project
	PSM6XBSU TR pathabundance relab.biom.bz2 File (Entity type)	A 27.8 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project
	CSM79HOZ ecs relab.biom.bz2 File (Entity type)	A 431 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project
	EP323428 K40 MV1R pathcoverage.tsv.bz2 File (Entity type)	A 5.62 KB file from HMP produced from OBI:0002760 as part of the MOMSPI project
	HMP2 J29330 R NS T0 B0 0120 ZLYEM2C-01 AC9387ANXX L003 R2.fastq.bz2 File (Entity type)	A 76.7 MB file from HMP produced from OBI:0002760 as part of the T2D project

PSMB4MBK pathabundance relab.biom.bz2

File (Entity type)

A 26.8 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project

EP285935 K50 MV1R.metatranscriptome.bve.profile.txt.bz2

File (Entity type)

A 1.18 KB file from HMP produced from OBI:0002760 as part of the MOMSPI project

HSM7J4QJ ecs relab.biom.bz2

File (Entity type)

A 403 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project

SRR5949556 2.fastq

File (Entity type)

A 2.48 GB file from HMP produced from OBI:0002760 as part of the IBDMDB project

CSM67UBH genefamilies relab.biom.bz2

File (Entity type)

A 367 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project

EP783101 K20 MV1R pathabundance.tsv.bz2

File (Entity type)

A 3.57 KB file from HMP produced from OBI:0002760 as part of the MOMSPI project

PSM6XBSU TR pathabundance relab.biom.bz2

File (Entity type)

A 27.8 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project

CSM79HOZ ecs relab.biom.bz2

File (Entity type)

A 431 KB file from HMP produced from OBI:0002760 as part of the IBDMDB project

EP323428 K40 MV1R pathcoverage.tsv.bz2

File (Entity type)

A 5.62 KB file from HMP produced from OBI:0002760 as part of the MOMSPI project

HMP2 J29330 R NS T0 B0 0120 ZLYEM2C-01 AC9387ANXX L003 R2.fastq.bz2

File (Entity type)

A 76.7 MB file from HMP produced from OBI:0002760 as part of the T2D project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.