whole metagenome sequencing assay (Assay Type)

Synonyms:WMS

Description:A DNA sequencing assay that intends to provide information on the DNA sequences of multiple genomes (a metagenome) from different organisms present in the same input sample.

Results found

Linked to

	Label	Description
	species all samples relative taxonomic abundance.txt File (Entity type)	A 6.30 MB file from HMP produced from OBI:0002623 as part of the HHS project
	genus all samples relative taxonomic abundance.txt File (Entity type)	A 1.65 MB file from HMP produced from OBI:0002623 as part of the HHS project
	order all samples relative taxonomic abundance.txt File (Entity type)	A 557 KB file from HMP produced from OBI:0002623 as part of the HHS project
	strain all samples relative taxonomic abundance.txt File (Entity type)	A 10.5 MB file from HMP produced from OBI:0002623 as part of the HHS project
	family all samples relative taxonomic abundance.txt File (Entity type)	A 876 KB file from HMP produced from OBI:0002623 as part of the HHS project
	phylum all samples relative taxonomic abundance.txt File (Entity type)	A 204 KB file from HMP produced from OBI:0002623 as part of the HHS project
	class all samples relative taxonomic abundance.txt File (Entity type)	A 354 KB file from HMP produced from OBI:0002623 as part of the HHS project
	hmp1-II metaphlan2-mtd-qcd.pcl.bz2 File (Entity type)	A 1.45 MB file from HMP produced from OBI:0002623 as part of the HHS project
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

species all samples relative taxonomic abundance.txt

File (Entity type)

A 6.30 MB file from HMP produced from OBI:0002623 as part of the HHS project

genus all samples relative taxonomic abundance.txt

File (Entity type)

A 1.65 MB file from HMP produced from OBI:0002623 as part of the HHS project

order all samples relative taxonomic abundance.txt

File (Entity type)

A 557 KB file from HMP produced from OBI:0002623 as part of the HHS project

strain all samples relative taxonomic abundance.txt

File (Entity type)

A 10.5 MB file from HMP produced from OBI:0002623 as part of the HHS project

family all samples relative taxonomic abundance.txt

File (Entity type)

A 876 KB file from HMP produced from OBI:0002623 as part of the HHS project

phylum all samples relative taxonomic abundance.txt

File (Entity type)

A 204 KB file from HMP produced from OBI:0002623 as part of the HHS project

class all samples relative taxonomic abundance.txt

File (Entity type)

A 354 KB file from HMP produced from OBI:0002623 as part of the HHS project

hmp1-II metaphlan2-mtd-qcd.pcl.bz2

File (Entity type)

A 1.45 MB file from HMP produced from OBI:0002623 as part of the HHS project

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.