chromatin interaction analysis by paired-end tag sequencing assay (Assay Type)

Synonyms:ChIA-PET, ChIA-PET assay

Description:An assay that incorporates chromatin immunoprecipitation (ChIP)-based enrichment, chromatin proximity ligation, Paired-End Tags, and high-throughput sequencing to determine de novo long-range chromatin interactions genome-wide.

Results found

Linked to

	Label	Description
	4DNFIWP8ENMB.bedpe.gz File (Entity type)	A 31.0 MB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project
	4DNFIF9YX3MG.bed.gz File (Entity type)	A 391 KB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project
	4DNFIV9RG6YP.hic File (Entity type)	A 1.05 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project
	4DNFIDPSVS1T.bedGraph.gz File (Entity type)	A 3.44 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project
	4DNFIZ5OINFT.bam File (Entity type)	A 20.3 GB file from 4DN produced from OBI:0001848 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIG1O7I87.pairs.gz File (Entity type)	A 122 MB file from 4DN produced from OBI:0001848 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIGCCXMAI.fastq.gz File (Entity type)	A 13.5 GB file from 4DN produced from OBI:0001848 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFI4H4LORO.fastq.gz File (Entity type)	A 39.2 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project
	4DNFI3OMB5VH.fastq.gz File (Entity type)	A 40.1 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project
	4DNFIMWNX9Z2.bam File (Entity type)	A 49.9 GB file from 4DN produced from OBI:0001848 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIWP8ENMB.bedpe.gz

File (Entity type)

A 31.0 MB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project

4DNFIF9YX3MG.bed.gz

File (Entity type)

A 391 KB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project

4DNFIV9RG6YP.hic

File (Entity type)

A 1.05 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project

4DNFIDPSVS1T.bedGraph.gz

File (Entity type)

A 3.44 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project

4DNFIZ5OINFT.bam

File (Entity type)

A 20.3 GB file from 4DN produced from OBI:0001848 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIG1O7I87.pairs.gz

File (Entity type)

A 122 MB file from 4DN produced from OBI:0001848 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIGCCXMAI.fastq.gz

File (Entity type)

A 13.5 GB file from 4DN produced from OBI:0001848 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFI4H4LORO.fastq.gz

File (Entity type)

A 39.2 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project

4DNFI3OMB5VH.fastq.gz

File (Entity type)

A 40.1 GB file from 4DN produced from OBI:0001848 as part of the 029a2578 43dc 4343 8f41 694518cce304 project

4DNFIMWNX9Z2.bam

File (Entity type)

A 49.9 GB file from 4DN produced from OBI:0001848 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.